Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905498.1_cds_XP_016455757.1_49658
CDS Infomation

[gene=LOC107779783] [db_xref=GeneID:107779783] [protein=rust resistance kinase Lr10-like] [protein_id=XP_016455757.1] [location=complement(join(97199..98358,98624..98653,98764..98796,98949..99026,99455..99758))] [gbkey=CDS]
Sequence

ATGTCTGGAGGAACCATGTTTCTTTCAGTTCTTACAATTCTCATCTTCTTGCAGCTCTCT
GACACCCCATTTGCTGAACAGAATCAGCGGTGTGCACCTTCTAGTTGTGGGCATATTAAG
AACATCAGCTACCCCTTTCGATTGAAAAATGATCCAAAGCATTGTGGCGACGAAAAGTAT
GAATTGAGCTGTGAAGGGAATCGCCCCATATTCACGATATTTATAGAAAATTGGAATGGG
TCTCTGAACTACTATGTGCAAGCCATCAATTATGATAACTCCACTATCCGCCTTGTAGAT
CCTGGTGAAAATTCAAGGGATGTTCGCTGTGTGGATTACACCTGCAAGGTTTACAATTTT
AGATTCTTCAAAACCTTATGTGTTACTCAAAGACACGTTCTCCGCGTTCTTGCAAGCATC
ATCCCATGGATGCTTCCCATATTTGGGCTTAGCATTGTGGCAAGAATCATACTATTCCCA
TGCATATTTGTGTTTCTAATGATTGAATTACGAAGAAGGCATATGTCGATCTTTGATGCA
ATTGAAAGTTTCCTGCATAGTAGAAACAATTTCATGCCCATTCGATACCCCTATTCCAAC
ATAAGGAAGATGACTAGGAATTTCAAAGAGAAACTAGGCCAAGGAGGTTATGGTTCAGTA
TATAAAGGCAAACTTCAAAGTGGTCCTAATGTTGCAGTGAAGATCTTGACCAAGCCCAAA
GCTGATGGGCAAGACTTCATCAATGAGGTTGCCACAATCGGGAGGATTCATCATGTTAAC
GTGGTACAACTTATTGGCTATTGTGCTGAGAGATCTAAACGTGCCCTCGTATATGACTTC
ATGCCTAATGGATCACTTGACAAATACATCACATCCCGAGAAGGAGGAACTCTACTGAGC
TGGCAAAGAAAGTCTGAAATCGCTCTTGGAGTTGCTCGAGGTATTGAATATTTGCATCGA
GGTTGTGACATACAAATTCTACATTTTGACATCAAGCCGCATAACATACTCTTGGATGAG
AATTTCGTTCCAAAAATTTCTGACTTTGGTCTGGCCAAATTATATCCAACTGATAACAGC
ATCGTTACTCTAACAGCAGCAAGGGGAACAATCGGATATGTAGCTCCAGAACTGATCAAC
AGAAGCATTGGTCCGNGAAGCATTGGTCCTATATCTTATAAGGCAGATGTTTATAGCTTT
GGAATGTTACTGATTGAGATAGCAGGTATGAAAGGAAACTCGGCAGCAAGAGAGGATATG
TCAAGCCAGTATTTCCCATATTGGATATATGATCAATTCGACAAGGAAAAGGAAATTGAA
GTACTAGACGAGACACATGATGGTGAAAAGAAGATTATAAAGAAGTTGACTTTAGTTGCT
TTGTGGTGCATACAAATGATTCCGCTTGATCGTCCCTCAATGACTAAAGTAGTGGAAATG
CTTGAAGGTGAATTACAGACTTTGCAAACGCCTCCTAGGCCTTCTGAATCACTGCAGCCA
TCTTCGTTGGAATTCAATCTGAGTTCTTCAATAGGTTCAACTGAGTCTATGATGTTGCTC
GGGAATTGTTCTGATTCTGCACAAGTAGATGTAATTATTGGTTGA

Peptide Sequence

PEP ID

XP_016455757.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like [Nicotiana tabacum]
Sequence

MSGGTMFLSVLTILIFLQLSDTPFAEQNQRCAPSSCGHIKNISYPFRLKNDPKHCGDEKY
ELSCEGNRPIFTIFIENWNGSLNYYVQAINYDNSTIRLVDPGENSRDVRCVDYTCKVYNF
RFFKTLCVTQRHVLRVLASIIPWMLPIFGLSIVARIILFPCIFVFLMIELRRRHMSIFDA
IESFLHSRNNFMPIRYPYSNIRKMTRNFKEKLGQGGYGSVYKGKLQSGPNVAVKILTKPK
ADGQDFINEVATIGRIHHVNVVQLIGYCAERSKRALVYDFMPNGSLDKYITSREGGTLLS
WQRKSEIALGVARGIEYLHRGCDIQILHFDIKPHNILLDENFVPKISDFGLAKLYPTDNS
IVTLTAARGTIGYVAPELINRSIGPXSIGPISYKADVYSFGMLLIEIAGMKGNSAAREDM
SSQYFPYWIYDQFDKEKEIEVLDETHDGEKKIIKKLTLVALWCIQMIPLDRPSMTKVVEM
LEGELQTLQTPPRPSESLQPSSLEFNLSSSIGSTESMMLLGNCSDSAQVDVIIG

Transcript Sequence

Gene sequence data has not been registered.